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This collection of case studies demonstrates how microfluidics-based qPCR provides a fast, scalable, and cost-efficient approach to detecting foodborne pathogens and monitoring contamination risks. From tracking Listeria outbreaks in food processing facilities to analyzing Salmonella contamination in floodwaters, these studies highlight the power of high-throughput qPCR with the Biomark™ X9 System for High-Throughput Genomics in food safety and environmental monitoring applications.