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Script Hub

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Get Started with Script Hub

Script Hub™ gives every lab access to the latest single-cell applications. Scripts available on Script Hub are developed by the C1™ user community to help you advance your research. Now you have a central hub to provide the resources and tools you need to readily implement new methods on your C1 system. 

With Script Hub, you can easily adjust and implement new experimental methods as your research strategy evolves on your existing Standard BioTools technology.

Cell Biology (2 scripts)

Delve into the functional implications of cell signaling and stimulation.

• Cell Staining (1)   • Cell dosing (1)

Single-Cell Genomics (15 scripts)

Unravel cellular heterogeneity with genetic and transcriptome analysis.

• Gene expression (9)   • Genetic analysis (1)
• Epigenetics (2)   • Immune profiling (1)
• Multi-omics (2)    

Contribute to Script Hub

Have you developed your own method, invented a completely new application or simplified a workflow? Generate your submission package from C1 Script Builder™ and submit it with the single-cell community on Script Hub. 

Frequently asked questions about Script Hub

To see all the available scripts, you can navigate by selecting an application, such as cell biology or single-cell genomics. You can refine your results by a key word search, and then sort or filter.

To download a script, navigate to the script of interest. Click Download.

Standard BioTools rates submitted scripts based on the level of scientific validation. These ratings help users evaluate methods before implementing them.



Fully wet-lab validated to confirm performance to published specifications. Tested on at least 5 distinct sample types with 3 biological replicates per sample. The data is publicly available and/or published in a peer-reviewed journal.


Published in a peer-reviewed publication and

utilized by 3 independent users with satisfactory results


utilized 3 or more sample types with satisfactory results.


Protocols that have been published in a peer-reviewed journal without replication or verification by an independent user or laboratory.


Unpublished protocols that have been run by at least 3 independent users. 


Unpublished protocols that have been run with at least 3 sample types with satisfactory results.


Unpublished protocols that have been uploaded but not yet independently confirmed by other users.



If you need help using Script Hub, contact or Standard BioTools Technical Support.

After you modify or develop new scripts for your C1 system using C1 Script Builder, you can share your new application with the single-cell community using Script Hub. Submit new scripts to

Standard BioTools evaluates every script submitted to Script Hub in an effort to provide users with a successful experience.

A successful script submission will contain (required):

  • Method overview
  • Authors, institution and lab
  • The cell types researched
  • Performance description (for example, mapped reads, standard deviations and so forth)
  • Estimated preparation time (in hours)
  • Number of integrated fluidic circuit runs
  • All associated reagents, primer sequences and concentrations

  • Enables a new application or method    
    Consider what will help the research community. New chemistries or biological applications are more likely to propel the single-cell community.

  • Completeness   
    To ensure that all single-cell users can implement your methods, be certain to include all reagents used, primer sequences and sample preparation steps.

  • Validation   
    Provide validation or performance data to help other researchers adopt your method faster.

  • Tags   
    Tag your script with all the relevant terms for easy access by other researchers.




Unless explicitly and expressly stated otherwise, all products are provided for Research Use Only, not for use in diagnostic procedures. Find more information here.