Products & Services Software

Software

Insight made easy

Get meaningful results from your research with our complete offering of automated, efficient data analysis software. Whether you're evaluating single cells, real-time PCR results or genotyping data, our advanced software programs include standard analysis techniques as well as superior interpretation methods to help you make the most of your work.

ACCESS ARRAY

Access Array AX Controller

The latest software for the Access Array™ IFC Controller AX. To install, follow the instructions in the Updating Software and Scripts section of the IFC Controller AX User Guide (PN 68000157).

FC1 Cycler Software

The latest software for the FC1™ cycler. To install, follow the instructions in the Updating Software and Protocols section of the FC1 Cycler User Guide (PN 100-1279).

BIOMARK HD

Biomark and EP1 Software

The latest software for the Biomark™ HD, Biomark and EP1™ systems. Package includes software for data collection, real-time PCR analysis, genotyping, digital PCR and melting curve analysis. To inst...

Biomark Pathogen Detection Software

Software that analyzes qPCR Ct data from Biomark HD to detect and identify mutations. For installation and instructions please reference the Biomark Pathogen Detection Software Quick Reference Guid...

CopyCount-CNV Software

The cloud-based software analyzes raw fluorescence qPCR data from Biomark™ HD to determine absolute quantification and provide DNA copy number results. Applications include transgene copy number, e...

GO Immuno-Oncology Workbench

GO Immuno-Oncology Workbench is designed to further analyze primary data obtained with the Advanta™ IO Gene Expression Assay. GO Immuno-Oncology Workbench enables users to analyze large cohorts, di...

IFC Controllers Software (HX, MX, RX, and WX)

The latest software for IFC Controllers HX, MX, RX and WX. To install, follow the instructions in the Update Software and Scripts section of the relevant IFC Controller User Guide (HX/MX, PN 680001...

Singular Analysis Toolset Software

An innovative, open-source solution for analyzing and visualizing data, the Singular™ Analysis Toolset offers powerful methods for identifying gene expression and mutation patterns at the single-ce...

C1

C1 mRNA Seq HT Demultiplex Script

The C1™ mRNA Sequencing High Throughput Demultiplexer Perl script application programming interface (API) allows automatic demultiplexing of individual single-cell samples from each column using th...

C1 System Software

The C1™ system supports DNA sequencing, mRNA sequencing, targeted gene expression, miRNA analysis and additional applications through the C1 Open App™ IFC (integrated fluidic circuit). Download the...

Script Builder Software

C1™ Script Builder™ allows you to create innovative single-cell applications to deeply explore cellular heterogeneity and the functional attributes of every cell population. Download the latest ver...

Script Hub

Script Hub™ is your central source for C1™ methods and applications. Get access to scripts and other applications developed by Fluidigm and the C1 community, including epigenetics, mRNA sequencing,...

Singular Analysis Toolset Software

An innovative, open-source solution for analyzing and visualizing data, the Singular™ Analysis Toolset offers powerful methods for identifying gene expression and mutation patterns at the single-ce...

CyTOF XT

Cytobank Analysis

Cytobank cloud-based data analysis software turns high-content data into high-impact knowledge by providing tools optimized for mass cytometry, including clustering (SPADE and viSNE), heat maps, do...

FCS Express

FCS Express™ is a fully integrated analysis, statistics, graphing and reporting tool for turning cytometry data into presentation-ready and publication-ready results. Full support for Fluidigm cyto...

Maxpar Pathsetter

Maxpar® Pathsetter™ is a fully automated reporting and data analysis solution that automatically identifies 37 immune cell types in FCS files from samples processed with the Maxpar Direct Immune Pr...

CyTOF Software v8.0

CyTOF® Software v8.0 offers support for cell suspension-based sample analysis to the CyTOF XT system. The software has the built-in capability for automated calibration, batch sample acquisition, a...

EP1

Biomark and EP1 Software

The latest software for the Biomark™ HD, Biomark and EP1™ systems. Package includes software for data collection, real-time PCR analysis, genotyping, digital PCR and melting curve analysis. To inst...

IFC Controllers Software (HX, MX, RX, and WX)

The latest software for IFC Controllers HX, MX, RX and WX. To install, follow the instructions in the Update Software and Scripts section of the relevant IFC Controller User Guide (HX/MX, PN 680001...

HELIOS, a CyTOF SYSTEM

Cytobank Analysis

Cytobank cloud-based data analysis software turns high-content data into high-impact knowledge by providing tools optimized for mass cytometry, including clustering (SPADE and viSNE), heat maps, do...

CyTOF Software

CyTOF® Software offers support for the imaging and cell suspension-based sample analysis to Hyperion™ Imaging System and Helios™ system users. The software has the built-in capability to switch sam...

CyTOF Software (Non-acquisition workstations only)

CyTOF® Software  offers support for imaging analysis to Hyperion™ Imaging System users.

FCS Express

FCS Express™ is a fully integrated analysis, statistics, graphing and reporting tool for turning cytometry data into presentation-ready and publication-ready results. Full support for Fluidigm cyto...

Maxpar Pathsetter

Maxpar® Pathsetter™ is a fully automated reporting and data analysis solution that automatically identifies 37 immune cell types in FCS files from samples processed with the Maxpar Direct Immune Pr...

HYPERION and Hyperion+ IMAGING SYSTEMs

CyTOF Software

CyTOF® Software offers support for the imaging and cell suspension-based sample analysis to Hyperion™ Imaging System and Helios™ system users. The software has the built-in capability to switch sam...

CyTOF Software (Non-acquisition workstations only)

CyTOF® Software  offers support for imaging analysis to Hyperion™ Imaging System users.

histoCAT

The histoCAT™ software is an innovative computational Imaging Mass Cytometry™ analysis toolbox that enables comprehensive analysis of cellular phenotypes and their interrelationships within the spa...

Indica Labs Software

The Indica Labs Highplex FL HALO® module combines ease of use and scalability with powerful analytics for streamlined biomarker analysis of highly multiplexed Imaging Mass Cytometry™ data. This mod...

MCD Viewer

MCD™ Viewer is post-acquisition data processing software that allows users to visualize, review, and export Imaging Mass Cytometry™ data acquired with the Hyperion™ Imaging System and CyTOF® Softwa...

Visiopharm Software

As high-plex IMC™ data continues to stretch our abilities to interrogate the tumor microenvironment, finding meaningful differences in your data becomes an ever more data-heavy and daunting challen...

JUNO

Advanta RNA-Seq Library Normalization Workbook

This custom Microsoft® Excel® workbook is designed for use with the Advanta™ RNA-Seq NGS Library Prep Kit and Advanta RNA-Seq XT NGS Library Prep Kits with the Juno™ system to automate calculations...

Juno Software

The latest software for the Juno™ system. To install, follow the instructions in the Juno System User Guide (100-7070).

POLARIS

Singular Analysis Toolset Software

An innovative, open-source solution for analyzing and visualizing data, the Singular™ Analysis Toolset offers powerful methods for identifying gene expression and mutation patterns at the single-ce...

X9 REAL-TIME PCR SYSTEM AND BIOMARK X

Standard BioTools X9 Instrument Software

The latest instrument software for the X9™ Real-Time PCR System and Biomark X™.  Package includes scripts that support use of the Integrated Preamp IFC for TaqMan® genotyping and Express 96 sc...

Standard BioTools Real-time PCR Analysis Software

The latest software for real-time PCR analysis of data generated by X9 and Biomark X. Package includes the software application installer for Windows® 10 (requires administrator privileges).

Download user guide

Standard BioTools SNP Genotyping Analysis Software

The latest software for genotyping analysis of data generated by X9 and Biomark X. Package includes the software application installer for Windows 10 (requires administrator privileges).

Download user guide

Advanta PGx Assay Preset

Script that contains default analysis settings optimized for the Advanta™ Pharmacogenomics (PGx) Assay.  Requires installation to the instrument software for Biomark X or X9.

Unless explicitly and expressly stated otherwise, all products are provided for Research Use Only, not for use in diagnostic procedures. Find more information here.